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<title>PhD. Thesis Biotechnology</title>
<link>http://10.9.150.37:8080/dspace//handle/atmiyauni/1413</link>
<description/>
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<rdf:li rdf:resource="http://10.9.150.37:8080/dspace//handle/atmiyauni/2326"/>
<rdf:li rdf:resource="http://10.9.150.37:8080/dspace//handle/atmiyauni/2289"/>
<rdf:li rdf:resource="http://10.9.150.37:8080/dspace//handle/atmiyauni/2288"/>
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<dc:date>2026-05-10T15:10:42Z</dc:date>
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<item rdf:about="http://10.9.150.37:8080/dspace//handle/atmiyauni/2326">
<title>Attenuation of Drug Induced Liver Toxicity by Targeted Therapy</title>
<link>http://10.9.150.37:8080/dspace//handle/atmiyauni/2326</link>
<description>Attenuation of Drug Induced Liver Toxicity by Targeted Therapy
Verma, Brijesh Kumar; Dr. Debashis, Banerjee
Liver toxicity remains a critical barrier in drug development and clinical therapeutics, with&#13;
mitochondrial dysfunction (MD) recognized as a central mechanism driving drug-induced liver&#13;
injury (DILI). Mitochondrial liabilities contribute substantially to compound attrition, postmarketing&#13;
drug withdrawals, and regulatory restrictions. Chloramphenicol, despite its broadspectrum&#13;
antimicrobial efficacy, has limited clinical use owing to its mitochondrial toxicity and&#13;
associated hepatotoxic effects. In light of these challenges, this research investigates whether&#13;
strategic combination therapy specifically with potent antioxidants can mitigate such adverse&#13;
effects, potentially rescuing otherwise valuable drugs from late-stage failure or regulatory&#13;
rejection. The study evaluates the hepatoprotective potential of two well-characterized&#13;
antioxidants, Astaxanthin and Quercetin, against chloramphenicol-induced mitochondrial&#13;
toxicity using integrated in-vitro and in-vivo models to elucidate mechanistic pathways and&#13;
therapeutic efficacy.In the in-vitro component, HepG2 liver cells were cultured under galactose-adapted conditions&#13;
to simulate enhanced mitochondrial reliance. Cells were exposed to chloramphenicol with or&#13;
without co-treatment of Astaxanthin or Quercetin. Assays for ATP production, reactive oxygen&#13;
species (ROS), and expression of key mitochondrial genes (SOD2, NRF1, SURF1, TFAM, and&#13;
UCP2) were performed. Results demonstrated significant ROS attenuation and mitochondrial&#13;
gene expression recovery with antioxidant treatment, indicating mitigation of chloramphenicolinduced&#13;
toxicity.In the in-vivo arm, male Wistar rats were administered chloramphenicol intraperitoneally,&#13;
followed by oral antioxidant therapy. Biochemical markers including glutathione (GSH) and&#13;
nitric oxide (NO) were quantified to assess oxidative stress. Both antioxidants significantly&#13;
restored GSH levels and reduced NO, with Quercetin showing slightly superior efficacy.&#13;
This integrated study demonstrates that both Astaxanthin and Quercetin confer mitochondrial&#13;
protection through modulation of oxidative stress and gene expression, suggesting their&#13;
therapeutic potential as adjuncts in antibiotic-induced hepatotoxicity. Future investigations&#13;
should focus on mechanistic insights, dose optimization, and clinical translation.
</description>
<dc:date>2025-08-01T00:00:00Z</dc:date>
</item>
<item rdf:about="http://10.9.150.37:8080/dspace//handle/atmiyauni/2289">
<title>Genome Editing through CRISPR Cas9 for Improvement of Beta Carotene in Groundnut [Arachis hypogaea (L.)]</title>
<link>http://10.9.150.37:8080/dspace//handle/atmiyauni/2289</link>
<description>Genome Editing through CRISPR Cas9 for Improvement of Beta Carotene in Groundnut [Arachis hypogaea (L.)]
Chovatiya, Ashish Vipulbhai; Joshi, Preetam
Precise genome editing tools are emerging as promising technology for&#13;
improving crop characteristics. The CRISPR/Cas9 as genome editing tool has proven a&#13;
highly versatile and efficient for generating targeted breaks in DNA, double stranded&#13;
breaks induced by this means are repaired either through error prone non homologous&#13;
end joining or homology directed repair. The non-homologous end joining repair&#13;
pathway cause numerous changes in DNA sequence such as substitution, insertion and&#13;
deletion generating knock out or altered protein/ enzyme. In contrast to the NHEJ, HDR&#13;
repairs DSBs through homologous recombination provided by a donor DNA template&#13;
with homologous flanking sequence, which allows knock-in (KI) of targeted locus in&#13;
genome. The main objective of the present study was to validate the efficacy of&#13;
CRISPR/Cas9 system in Groundnut. Globally, vitamin A deficiency (VAD) is a serious&#13;
health issue. In areas where VAD is a significant issue, biofortification of staple crops&#13;
is a practical and affordable way to provide micronutrients to populations with limited&#13;
access to varied meals. In many developing nations, the commercial groundnut is a&#13;
staple crop that ensures food security. The allotetraploid genome of groundnuts makes&#13;
it challenging to introduce new features through traditional breeding. Nonetheless,&#13;
provitamin A carotenoids (pVACs) in groundnuts may be improved with the&#13;
application of contemporary biotechnology technologies. The Newline In this study,&#13;
we used both gain-of-function (overexpression) and loss-of-function (CRISPR/Cas9)&#13;
strategies to increase the content of pVACs. For genetic transformation, groundnut&#13;
(GJG20) tissue culture was employed. 1-deoxy-d-xylulose-5-phosphate synthase&#13;
(DXS2) was found in the investigation. Groundnut genome-editing (GE) was first&#13;
developed by using CRISPR/Cas9 to target phytoene desaturase (PDS), and then it was&#13;
applied to lycopene epsilon-cyclase editing. superior to the control in terms of beta&#13;
carotene equivalent. In contrast, lines that overexpressed PSY1 accumulated a&#13;
considerable amount of lutein (up to around 3.2 times). Compared to the control, the&#13;
LCYE-edited lines displayed a roughly three-fold increase in beta-carotene content and&#13;
a decrease in both lutein and beta-carotene levels. The development of a nutritionally&#13;
enhanced CRISPR/Cas9 method for South Asian countries with high VAD prevalence,&#13;
like India, has advanced significantly with the current study.
</description>
<dc:date>2024-12-01T00:00:00Z</dc:date>
</item>
<item rdf:about="http://10.9.150.37:8080/dspace//handle/atmiyauni/2288">
<title>Morpho-Physiological Studies on Micropropagated Rose as Influenced by Liquid Culture System and Culture Vessels Environment</title>
<link>http://10.9.150.37:8080/dspace//handle/atmiyauni/2288</link>
<description>Morpho-Physiological Studies on Micropropagated Rose as Influenced by Liquid Culture System and Culture Vessels Environment
Nirmal, Dhaval Atulkumar; Joshi, Preetam
Roses, from the genus Rosa, are cherished flowers known for their beauty,&#13;
fragrance, and cultural symbolism, especially in love and romance. They hold economic&#13;
importance in the floral, perfume, and cosmetic industries. Additionally, roses have&#13;
therapeutic uses (anti-inflammatory and antioxidant properties), ecological benefits for&#13;
pollinators, and culinary applications in teas and desserts. Their iconic appeal and&#13;
versatility make roses valuable globally.&#13;
This study has focused on exploring optimal in vitro propagation techniques for&#13;
Rose, with an emphasis on the innovative use of a liquid culture system. Although&#13;
conventional plant tissue culture typically employs agar-gelled semi-solid media, the&#13;
high production costs associated with this method have driven the search for more&#13;
efficient alternatives.&#13;
This investigation undertook an in-depth study of various factors, including&#13;
support materials, temporary immersion systems, types of culture vessels, and CO₂&#13;
enrichment, to assess the feasibility of a liquid culture system for micropropagating&#13;
Rose. The results indicated that the liquid medium substantially outperformed the&#13;
traditional semi-solid medium in promoting in vitro growth and shoot multiplication of&#13;
Rose.&#13;
The selection of support matrix was pivotal, with glass marbles identified as the&#13;
best choice due to their inertness, ability to be autoclaved, and reusability.&#13;
Implementing a temporary immersion system in the liquid medium brought significant&#13;
advantages, enhancing both shoot elongation and multiplication, along with a marked&#13;
increase in leaf area. CO₂ enrichment, especially in combination with sucrose, proved&#13;
essential for achieving optimal in vitro plant growth, with the liquid medium showing&#13;
superior results under CO₂-enriched conditions.&#13;
Additionally, the choice of culture vessels, gelling agent, and rooting medium&#13;
significantly impacted the overall growth and rooting ability of Rose. The liquid culture&#13;
system consistently produced robust plants with improved traits and higher survival rates during in vitro hardening. Scanning electron microscopy and histological analyses&#13;
revealed structural differences in leaf surfaces and root tissues, suggesting the potential&#13;
for faster acclimatization in plants grown in liquid medium&#13;
Random Amplified Polymorphic DNA (RAPD) analysis was conducted to&#13;
verify the genetic stability of the propagated plants, confirming the consistency of&#13;
micropropagules and plantlets across various growth conditions. This assurance of&#13;
genetic fidelity reinforced the liquid culture system’s suitability for large-scale&#13;
cultivation.&#13;
In conclusion, implementing a liquid culture system with modified growth&#13;
conditions provides a cost-effective and efficient alternative to traditional agar-gelled&#13;
media for the micropropagation of Rose. This study’s findings offer valuable insights&#13;
into optimizing in vitro conditions, improving plant growth and morpho-physiological&#13;
development while ensuring genetic stability. These advancements open up new&#13;
opportunities for economically sustainable large-scale rose cultivation, supporting&#13;
progress in horticulture and floriculture.
</description>
<dc:date>2024-12-01T00:00:00Z</dc:date>
</item>
<item rdf:about="http://10.9.150.37:8080/dspace//handle/atmiyauni/2287">
<title>Detection of Adulteration in Herbal Formulation Containing Phyllanthus emblica, Terminalia bellirica and Terminalia chebula using DNA Based Approach</title>
<link>http://10.9.150.37:8080/dspace//handle/atmiyauni/2287</link>
<description>Detection of Adulteration in Herbal Formulation Containing Phyllanthus emblica, Terminalia bellirica and Terminalia chebula using DNA Based Approach
Travadi, Tasnim Hunedbhai; Joshi, Preetam; Joshi, Madhvi
The increasing global demand for herbal medicines and dietary supplements, while&#13;
offering potential health benefits, has also raised concerns about product quality and&#13;
authenticity. Herbal products, often derived from traditional knowledge and practices,&#13;
are susceptible to adulteration due to factors like species similarity and the surge in&#13;
demand for specific therapeutic properties. This study focuses on three traditionally and&#13;
economically important medicinal species, Terminalia bellirica (TB), Terminalia&#13;
chebula (TC), and Phyllanthus emblica (PE), known for their therapeutic benefits and&#13;
often subjected to adulteration. DNA-based methods tend to be more reliable, accurate&#13;
and cost-effective for authentication. The isolating of high-quality amplifiable DNA&#13;
from these plant species, especially in processed products, remains challenging. This is&#13;
primarily due to the presence of polyphenols, which interfere with DNA extraction and&#13;
amplification. To address this, the study developed an optimized DNA isolation&#13;
protocol. This protocol incorporated specific buffer modifications to stabilize pH&#13;
during extraction and introduced polyvinylpyrrolidone as a phenolic compound&#13;
scavenger to minimize interference during cell lysis. The effectiveness of this optimized&#13;
protocol was evaluated using the species-specific ITS-based SCAR markers, digital&#13;
PCR and ITS2 metabarcode on six of each Baheda (TB fruit), Harde (TC fruit), Amala&#13;
(PE fruits) and Triphala (containing three fruits of TB, TC, and PE) market formulation.&#13;
Results demonstrated a significant improvement in DNA quality and quantity, leading&#13;
to successful species identification. Furthermore, the study employed digital PCR&#13;
(dPCR) to enhance sensitivity, achieving a two-fold increase compared to conventional&#13;
PCR. This marks the first reported instance of a dPCR application for authenticating&#13;
TB, TC, and PE. This research underscores the critical role of optimized DNA isolation&#13;
protocols in ensuring the quality and authenticity of herbal products. By effectively&#13;
addressing the challenges posed by polyphenols and employing sensitive detection&#13;
methods like dPCR, this study provides a robust framework for authenticating herbal&#13;
materials, ultimately contributing to consumer safety and confidence in the herbal&#13;
medicine market.
</description>
<dc:date>2025-01-10T00:00:00Z</dc:date>
</item>
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